Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb2945Cytochrome c, mono- and diheme variants. (149 aa)    
Predicted Functional Partners:
amb2944
Nitric oxide reductase large subunit; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
amb1395
Nitrite reductase precursor.
 
 
  0.992
amb4165
Nitrite reductase precursor.
 
 
  0.992
amb2942
Nitric oxide reductase activation protein.
 
  
 0.989
amb3086
Nitrous oxide reductase.
 
 
 0.989
amb2943
Denitrification regulatory protein nirQ.
 
  
 0.972
amb2941
Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 
 
 0.942
amb4089
Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.932
amb4088
Ubiquinol-cytochrome C reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.870
amb3081
Nitrous oxidase accessory protein.
 
  
 0.847
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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