STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2956Response regulator containing a CheY-like receiver domain and an HD-GYP domain. (384 aa)    
Predicted Functional Partners:
amb2954
Signal transduction histidine kinase.
 
 
 
 0.957
amb2955
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
   
0.854
amb1050
Signal transduction histidine kinase.
 
 
 
 0.830
amb1043
Signal transduction histidine kinase.
 
 
 
 0.802
amb1432
Signal transduction histidine kinase.
 
 
 0.626
amb4146
Signal transduction histidine kinase.
 
 
 0.604
amb2293
Signal transduction histidine kinase.
 
 
 0.601
amb1841
Hypothetical protein.
 
 
0.565
amb2930
Sensor protein barA.
 
 
 0.540
amb1110
Signal transduction histidine kinase.
  
 
 0.538
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.