STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2963Hypothetical protein. (299 aa)    
Predicted Functional Partners:
amb2964
Hypothetical protein.
       0.773
amb2961
Hypothetical protein.
  
 
 0.764
amb2959
Hypothetical protein.
       0.732
amb2960
Hypothetical protein.
       0.732
amb2962
Hypothetical protein.
       0.732
amb2958
Hypothetical protein.
       0.640
amb1139
Autotransporter adhesin.
  
    0.516
amb1998
Hypothetical protein.
  
    0.516
amb3277
RTX toxins and related Ca2+-binding protein.
  
    0.516
amb3773
Large exoprotein involved in heme utilization or adhesion.
  
    0.516
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.