Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb2965Membrane carboxypeptidase/penicillin-binding protein PbpC. (785 aa)    
Predicted Functional Partners:
amb2966
Large extracellular alpha-helical protein.
 
   
 0.961
amb3516
Cell division protein FtsI/penicillin-binding protein 2.
  
  
 0.951
amb3236
Membrane carboxypeptidase/penicillin-binding protein.
  
  
0.933
amb0524
Membrane carboxypeptidase.
  
  
0.932
amb3842
Cell division protein FtsI/penicillin-binding protein 2.
  
  
 0.932
amb2451
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.903
amb2967
Hypothetical protein.
       0.787
amb2969
Hypothetical protein.
       0.702
mrdB
Bacterial cell division membrane protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
  
   
 0.649
amb3867
Membrane protein related to metalloendopeptidase.
  
     0.648
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.