STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2985FAD/FMN-containing dehydrogenase. (457 aa)    
Predicted Functional Partners:
amb1990
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.956
amb0289
NADP-dependent malic enzyme.
  
 
 0.930
amb0720
NADP-dependent malic enzyme.
  
 
 0.930
amb4129
Fe-S oxidoreductase.
  
 0.924
pdhA
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.918
amb2317
Pyruvate dehydrogenase E1 component, beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.917
amb2649
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
    
 0.913
amb1555
Pyruvate kinase isozyme G, chloroplast; Belongs to the pyruvate kinase family.
   
 0.912
amb3174
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.912
amb1208
Zn-dependent hydrolase; Including glyoxylase.
    
 0.906
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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