Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
amb1984 | amb3003 | amb1984 | amb3003 | Methyl-accepting chemotaxis protein. | Methylase of chemotaxis methyl-accepting protein. | 0.899 |
amb1984 | amb3004 | amb1984 | amb3004 | Methyl-accepting chemotaxis protein. | Gliding motility regulatory protein. | 0.901 |
amb1984 | amb3007 | amb1984 | amb3007 | Methyl-accepting chemotaxis protein. | Chemotaxis signal transduction protein. | 0.878 |
amb1984 | amb3880 | amb1984 | amb3880 | Methyl-accepting chemotaxis protein. | Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | 0.853 |
amb1984 | cheB3 | amb1984 | amb3002 | Methyl-accepting chemotaxis protein. | Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.909 |
amb2826 | amb3003 | amb2826 | amb3003 | Methyl-accepting chemotaxis protein. | Methylase of chemotaxis methyl-accepting protein. | 0.899 |
amb2826 | amb3004 | amb2826 | amb3004 | Methyl-accepting chemotaxis protein. | Gliding motility regulatory protein. | 0.907 |
amb2826 | amb3007 | amb2826 | amb3007 | Methyl-accepting chemotaxis protein. | Chemotaxis signal transduction protein. | 0.934 |
amb2826 | amb3880 | amb2826 | amb3880 | Methyl-accepting chemotaxis protein. | Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | 0.852 |
amb2826 | cheB3 | amb2826 | amb3002 | Methyl-accepting chemotaxis protein. | Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.919 |
amb3001 | amb3003 | amb3001 | amb3003 | Methyl-accepting chemotaxis protein. | Methylase of chemotaxis methyl-accepting protein. | 0.985 |
amb3001 | amb3004 | amb3001 | amb3004 | Methyl-accepting chemotaxis protein. | Gliding motility regulatory protein. | 0.978 |
amb3001 | amb3007 | amb3001 | amb3007 | Methyl-accepting chemotaxis protein. | Chemotaxis signal transduction protein. | 0.983 |
amb3001 | amb3880 | amb3001 | amb3880 | Methyl-accepting chemotaxis protein. | Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | 0.854 |
amb3001 | cheB3 | amb3001 | amb3002 | Methyl-accepting chemotaxis protein. | Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.984 |
amb3003 | amb1984 | amb3003 | amb1984 | Methylase of chemotaxis methyl-accepting protein. | Methyl-accepting chemotaxis protein. | 0.899 |
amb3003 | amb2826 | amb3003 | amb2826 | Methylase of chemotaxis methyl-accepting protein. | Methyl-accepting chemotaxis protein. | 0.899 |
amb3003 | amb3001 | amb3003 | amb3001 | Methylase of chemotaxis methyl-accepting protein. | Methyl-accepting chemotaxis protein. | 0.985 |
amb3003 | amb3004 | amb3003 | amb3004 | Methylase of chemotaxis methyl-accepting protein. | Gliding motility regulatory protein. | 0.979 |
amb3003 | amb3007 | amb3003 | amb3007 | Methylase of chemotaxis methyl-accepting protein. | Chemotaxis signal transduction protein. | 0.953 |
page 1 of 4