STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3013Hypothetical protein. (305 aa)    
Predicted Functional Partners:
amb3017
Cytochrome c-type protein nrfB precursor.
 
   
 0.916
amb3015
Cytochrome c-552 precursor.
     
 0.783
amb3014
NAD(P)H-nitrite reductase.
     
 0.774
amb3016
Hypothetical protein.
     
 0.768
amb2687
Nitrate reductase cytochrome c-type subunit; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
  
  
 0.635
amb3018
Hypothetical protein.
  
 
 0.613
amb1464
Hypothetical protein.
  
     0.568
amb0330
ABC-type transport system; Involved in resistance to organic solvents, periplasmic component.
  
     0.528
amb4417
Hypothetical protein.
  
    0.512
amb0809
Hypothetical protein.
  
     0.487
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.