STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3041Uncharacterized protein conserved in bacteria. (163 aa)    
Predicted Functional Partners:
amb1448
Uncharacterized protein; Conserved in bacteria.
  
     0.717
amb4317
Hypothetical protein.
  
     0.711
amb3040
Ferredoxin.
       0.682
amb3136
Hypothetical protein.
  
     0.658
amb0625
PAS/PAC domain.
  
   
 0.647
amb3472
Uncharacterized protein conserved in bacteria.
  
     0.642
amb0302
Skin secretory protein xP2 precursor.
  
     0.641
amb3823
Flagellar assembly protein fliX.
  
     0.619
amb0501
FlbE protein.
  
     0.566
amb3739
Flp pilus assembly protein, protease CpaA.
  
     0.542
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.