Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
amb3053Cellulose synthase catalytic subunit. (885 aa)    
Predicted Functional Partners:
amb3050
ATPase involved in chromosome partitioning.
  
 
 0.581
amb1110
Signal transduction histidine kinase.
  
  
 0.578
amb0708
Predicted O-linked N-acetylglucosamine transferase; SPINDLY family.
  
 
 0.560
amb0751
Cytochrome c' precursor.
  
     0.556
amb4019
Predicted methyltransferase; TPR repeat.
 
 
 0.552
amb1450
Succinoglycan biosynthesis transport protein exoP.
  
  
 0.542
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
     
 0.520
amb3054
Methyl-accepting chemotaxis protein.
       0.483
amb1281
Predicted signal transduction protein containing a membrane domain; EAL and a GGDEF domain.
  
  
 0.472
amb2236
TPR repeat.
  
 
 0.470
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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