STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3077Hypothetical protein. (165 aa)    
Predicted Functional Partners:
amb3081
Nitrous oxidase accessory protein.
 
  
 0.958
amb3078
ABC-type multidrug transport system, ATPase component.
 
  
 0.954
amb3076
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
  
 0.937
amb3079
Polyferredoxin.
 
  
 0.925
amb3080
Ferredoxin.
 
   
 0.911
amb3082
Hypothetical protein.
 
     0.911
amb3086
Nitrous oxide reductase.
 
  
 0.896
amb3083
Cytochrome c553.
 
     0.694
amb2942
Nitric oxide reductase activation protein.
  
    0.610
amb2221
Heme/copper-type cytochrome/quinol oxidase, subunit 2.
  
   
 0.506
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.