STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3078ABC-type multidrug transport system, ATPase component. (281 aa)    
Predicted Functional Partners:
amb3081
Nitrous oxidase accessory protein.
 
 0.981
amb3076
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 
 0.978
amb3077
Hypothetical protein.
 
 
 0.965
amb3082
Hypothetical protein.
 
 
 0.936
amb0183
ABC-type multidrug transport system; Permease component.
 
  
 0.927
amb3079
Polyferredoxin.
 
  
 0.920
amb4213
ABC-type multidrug transport system, ATPase component; ABC-type uncharacterized transport system, ATPase component.
 
    
0.914
amb3080
Ferredoxin.
 
    0.898
amb3086
Nitrous oxide reductase.
 
 
 0.894
amb0182
ABC-type multidrug transport system; ATPase component.
 
     
0.890
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.