Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
amb3078ABC-type multidrug transport system, ATPase component. (281 aa)    
Predicted Functional Partners:
amb3081
Nitrous oxidase accessory protein.
  
 0.972
amb3076
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 
 0.959
amb3077
Hypothetical protein.
 
  
 0.954
amb0183
ABC-type multidrug transport system; Permease component.
 
  
 0.929
amb3079
Polyferredoxin.
 
  
 0.920
amb3082
Hypothetical protein.
 
  
 0.919
amb4213
ABC-type multidrug transport system, ATPase component; ABC-type uncharacterized transport system, ATPase component.
 
    
0.913
amb3080
Ferredoxin.
 
    0.897
amb0182
ABC-type multidrug transport system; ATPase component.
 
     
0.890
amb3086
Nitrous oxide reductase.
 
  
 0.849
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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