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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3177Permease of the major facilitator superfamily. (437 aa)    
Predicted Functional Partners:
amb3176
Probable tartrate dehydrogenase.
     
 0.698
amb0801
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
  
 0.572
amb2598
Transcriptional regulator.
 
  
 0.544
amb4477
Permease of the major facilitator superfamily.
  
  
 0.541
amb0803
5-carboxymethyl-2-hydroxymuconate isomerase.
 
    0.540
amb3175
Putative glycerate kinase.
       0.519
amb3174
Pyruvate kinase; Belongs to the pyruvate kinase family.
       0.517
amb3178
Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain.
       0.478
amb0802
2-keto-4-pentenoate hydratase.
  
    0.475
amb3179
Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain.
       0.473
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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