STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3188Hypothetical protein. (183 aa)    
Predicted Functional Partners:
amb3189
Hypothetical protein.
 
     0.953
amb0495
DNA polymerase III; Gamma/tau subunits.
  
     0.774
amb0319
Hypothetical protein.
  
     0.770
amb0025
Hypothetical PE-PGRS family protein Rv1325c/MT1367 precursor; Msp1.
  
     0.762
amb3928
Antifreeze glycopeptide polyprotein precursor.
  
     0.758
amb2364
Hypothetical 288 kDa protein in nifR3-like 5'region.
  
     0.754
amb0021
Hypothetical protein.
  
     0.747
hisZ
ATP phosphoribosyltransferase involved in histidine biosynthesis; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.
 
     0.732
amb2489
Outer membrane protein.
  
     0.731
amb2845
Hypothetical protein.
  
     0.730
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.