STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3233Indolepyruvate oxidoreductase subunit IORA; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (618 aa)    
Predicted Functional Partners:
amb3234
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase, gamma subunit.
 
 
 0.973
amb1990
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.770
amb2145
627aa long 2-oxoacid--ferredoxin oxidoreductasealpha subunit.
 
 
 0.734
amb1676
NADH dependant phenylglyoxylate.
 
 
 0.653
amb0180
Ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductase; Gamma subunit.
 
 
 0.597
amb1680
NADH dependant phenylglyoxylate.
 
  
 0.546
amb3235
FOG: CheY-like receiver.
       0.545
amb1056
Succinate dehydrogenase/fumarate reductase; Flavoprotein subunit.
  
 
 0.540
amb3952
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.540
amb1245
Coenzyme F390 synthetase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
    0.485
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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