STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3289Fe-S-cluster-containing hydrogenase components 1. (242 aa)    
Predicted Functional Partners:
amb3286
Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 0.998
amb3288
Tetrathionate reductase subunit C.
 
 0.998
amb3377
Fe-S-cluster-containing hydrogenase components 1.
  
  
 
0.916
amb1299
Rhodanese-related sulfurtransferase.
     
 0.904
amb0855
Hypothetical protein.
     
  0.900
amb0856
Predicted secreted protein.
     
  0.900
napA
Anaerobic dehydrogenase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
  
 
 0.801
amb3291
Signal transduction histidine kinase.
 
   
 0.797
amb2015
Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.775
amb2674
Cytochrome b subunit of formate dehydrogenase.
  
 
 0.764
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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