STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3291Signal transduction histidine kinase. (563 aa)    
Predicted Functional Partners:
amb3290
Response regulator.
 
 0.964
amb1947
Predicted ATPase.
 
  
 0.936
amb1466
Predicted ATPase.
 
  
 0.904
amb3286
Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.898
amb3288
Tetrathionate reductase subunit C.
 
   
 0.896
amb2930
Sensor protein barA.
 
0.880
amb0898
Response regulator.
 
 0.842
amb2936
Predicted ATPase.
 
  
 0.839
amb0897
Response regulator.
 
 0.826
amb3289
Fe-S-cluster-containing hydrogenase components 1.
 
   
 0.797
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.