Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb3302Hypothetical protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (412 aa)    
Predicted Functional Partners:
amb3301
Response regulator containing a CheY-like receiver domain and a GGDEF domain.
   
 
 0.790
amb0433
Surface lipoprotein.
   
 
 0.665
amb1435
Surface lipoprotein.
   
 
 0.665
amb0602
Outer membrane protein and related peptidoglycan-associated protein.
   
 
 0.635
amb3437
Uncharacterized conserved protein.
  
    0.612
amb2240
TPR repeat; SEL1 subfamily.
  
 
 
 0.449
amb2478
16S RNA G1207 methylase RsmC; Belongs to the methyltransferase superfamily.
  
     0.442
amb1544
Predicted signal-transduction protein containing cAMP-binding and CBS domains.
 
     0.409
amb3558
C4-dicarboxylate transport sensor protein dctB.
  
    0.406
amb3935
Uncharacterized protein conserved in bacteria.
      
 0.404
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.