Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| amb0334 | amb1873 | Serine phosphatase RsbU; Regulator of sigma subunit. | Signal transduction histidine kinase. | 0.877 |
| amb0334 | amb2205 | Serine phosphatase RsbU; Regulator of sigma subunit. | Signal transduction histidine kinase. | 0.798 |
| amb0334 | amb3303 | Serine phosphatase RsbU; Regulator of sigma subunit. | Predicted redox protein, regulator of disulfide bond formation. | 0.593 |
| amb0606 | amb2153 | Uncharacterized protein; Containing LysM domain. | Putative Ser protein kinase. | 0.418 |
| amb0606 | amb2349 | Uncharacterized protein; Containing LysM domain. | Hypothetical protein. | 0.403 |
| amb0606 | amb2978 | Uncharacterized protein; Containing LysM domain. | Cu/Zn superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.468 |
| amb0606 | amb3303 | Uncharacterized protein; Containing LysM domain. | Predicted redox protein, regulator of disulfide bond formation. | 0.526 |
| amb0606 | amb4017 | Uncharacterized protein; Containing LysM domain. | Multimeric flavodoxin WrbA. | 0.693 |
| amb1873 | amb0334 | Signal transduction histidine kinase. | Serine phosphatase RsbU; Regulator of sigma subunit. | 0.877 |
| amb1873 | amb2205 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.973 |
| amb1873 | amb3303 | Signal transduction histidine kinase. | Predicted redox protein, regulator of disulfide bond formation. | 0.442 |
| amb2153 | amb0606 | Putative Ser protein kinase. | Uncharacterized protein; Containing LysM domain. | 0.418 |
| amb2153 | amb2456 | Putative Ser protein kinase. | Related to diketogulonate reductase. | 0.716 |
| amb2153 | amb3303 | Putative Ser protein kinase. | Predicted redox protein, regulator of disulfide bond formation. | 0.493 |
| amb2153 | amb4017 | Putative Ser protein kinase. | Multimeric flavodoxin WrbA. | 0.578 |
| amb2205 | amb0334 | Signal transduction histidine kinase. | Serine phosphatase RsbU; Regulator of sigma subunit. | 0.798 |
| amb2205 | amb1873 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.973 |
| amb2205 | amb3303 | Signal transduction histidine kinase. | Predicted redox protein, regulator of disulfide bond formation. | 0.432 |
| amb2349 | amb0606 | Hypothetical protein. | Uncharacterized protein; Containing LysM domain. | 0.403 |
| amb2349 | amb3303 | Hypothetical protein. | Predicted redox protein, regulator of disulfide bond formation. | 0.544 |
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