Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
amb1298 | amb1535 | Methyl-accepting chemotaxis protein. | Response regulator containing a CheY-like receiver domain and a GGDEF domain. | 0.515 |
amb1298 | amb1945 | Methyl-accepting chemotaxis protein. | Response regulator; Containing a CheY-like receiver domain and a GGDEF domain. | 0.404 |
amb1298 | amb2248 | Methyl-accepting chemotaxis protein. | FOG: PAS/PAC domain. | 0.476 |
amb1298 | amb2830 | Methyl-accepting chemotaxis protein. | Response regulator containing a CheY-like receiver domain and a GGDEF domain. | 0.459 |
amb1298 | amb3312 | Methyl-accepting chemotaxis protein. | PvrR. | 0.987 |
amb1298 | amb3405 | Methyl-accepting chemotaxis protein. | Response regulator containing a CheY-like receiver domain and a GGDEF domain; PAS/PAC domain. | 0.454 |
amb1298 | amb3451 | Methyl-accepting chemotaxis protein. | Response regulator containing a CheY-like receiver domain and a GGDEF domain. | 0.533 |
amb1298 | amb4000 | Methyl-accepting chemotaxis protein. | Response regulator containing a CheY-like receiver domain and a GGDEF domain. | 0.400 |
amb1535 | amb1298 | Response regulator containing a CheY-like receiver domain and a GGDEF domain. | Methyl-accepting chemotaxis protein. | 0.515 |
amb1535 | amb2830 | Response regulator containing a CheY-like receiver domain and a GGDEF domain. | Response regulator containing a CheY-like receiver domain and a GGDEF domain. | 0.426 |
amb1535 | amb3312 | Response regulator containing a CheY-like receiver domain and a GGDEF domain. | PvrR. | 0.986 |
amb1535 | amb3451 | Response regulator containing a CheY-like receiver domain and a GGDEF domain. | Response regulator containing a CheY-like receiver domain and a GGDEF domain. | 0.426 |
amb1945 | amb1298 | Response regulator; Containing a CheY-like receiver domain and a GGDEF domain. | Methyl-accepting chemotaxis protein. | 0.404 |
amb1945 | amb3312 | Response regulator; Containing a CheY-like receiver domain and a GGDEF domain. | PvrR. | 0.972 |
amb1945 | amb3405 | Response regulator; Containing a CheY-like receiver domain and a GGDEF domain. | Response regulator containing a CheY-like receiver domain and a GGDEF domain; PAS/PAC domain. | 0.403 |
amb2248 | amb1298 | FOG: PAS/PAC domain. | Methyl-accepting chemotaxis protein. | 0.476 |
amb2248 | amb2830 | FOG: PAS/PAC domain. | Response regulator containing a CheY-like receiver domain and a GGDEF domain. | 0.417 |
amb2248 | amb3312 | FOG: PAS/PAC domain. | PvrR. | 0.986 |
amb2248 | amb3451 | FOG: PAS/PAC domain. | Response regulator containing a CheY-like receiver domain and a GGDEF domain. | 0.425 |
amb2830 | amb1298 | Response regulator containing a CheY-like receiver domain and a GGDEF domain. | Methyl-accepting chemotaxis protein. | 0.459 |
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