STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3364Uncharacterized conserved protein. (253 aa)    
Predicted Functional Partners:
amb0297
Precorrin-2 methylase; Belongs to the precorrin methyltransferase family.
    
 0.918
amb0294
Uncharacterized conserved protein.
     
  0.900
amb3363
Uroporphyrinogen-III methylase; Belongs to the precorrin methyltransferase family.
  
  
 0.876
amb0298
Precorrin-3B methylase.
     
 0.570
amb0296
Precorrin-6Y C5,15-methyltransferase.
     
 0.564
cysC
NodQ bifunctional enzyme; Catalyzes the synthesis of activated sulfate.
  
  
 0.558
amb3362
Kef-type K+ transport systems, predicted NAD-binding component.
       0.517
amb0515
Uroporphyrinogen-III methylase; Belongs to the precorrin methyltransferase family.
  
  
 0.478
amb1400
Uroporphyrinogen-III methylase.
  
  
 0.478
amb1159
3'-phosphoadenosine 5'-phosphosulfate sulfotransferase/FAD synthetase and related enzyme.
  
  
 0.447
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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