STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3364Uncharacterized conserved protein. (253 aa)    
Predicted Functional Partners:
amb0297
Precorrin-2 methylase; Belongs to the precorrin methyltransferase family.
    
 0.921
amb0294
Uncharacterized conserved protein.
     
  0.900
amb3363
Uroporphyrinogen-III methylase; Belongs to the precorrin methyltransferase family.
  
  
 0.874
cysC
NodQ bifunctional enzyme; Catalyzes the synthesis of activated sulfate.
  
  
 0.614
amb0296
Precorrin-6Y C5,15-methyltransferase.
     
 0.568
amb0298
Precorrin-3B methylase.
     
 0.568
amb3362
Kef-type K+ transport systems, predicted NAD-binding component.
       0.517
amb0515
Uroporphyrinogen-III methylase; Belongs to the precorrin methyltransferase family.
  
  
 0.467
amb1400
Uroporphyrinogen-III methylase.
  
  
 0.467
amb2209
Sulfite reductase; Beta subunit (hemoprotein); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.458
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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