STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3366Probable taurine catabolism dioxygenase. (288 aa)    
Predicted Functional Partners:
amb3367
Sulfite reductase, dissimilatory-type alpha subunit.
 
     0.876
amb3368
Sulfite reductase, dissimilatory-type beta subunit.
 
     0.875
amb3370
Uncharacterized protein involved in the oxidation of intracellular sulfur.
 
     0.861
amb3369
Intracellular sulfur oxidation protein dsrE.
 
     0.855
amb3371
Uncharacterized conserved protein involved in oxidation of intracellular sulfur.
 
     0.842
amb3373
Nitrate reductase gamma subunit.
 
     0.818
amb3374
Fe-S oxidoreductase.
 
     0.813
amb3376
Hdr-like menaquinol oxidoreductase cytochrome c subunit.
 
     0.809
amb3378
Hdr-like menaquinol oxidoreductase integral membrane subunit.
 
     0.805
amb3375
NADPH-dependent glutamate synthase beta chain and related oxidoreductase.
 
     0.797
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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