STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3374Fe-S oxidoreductase. (500 aa)    
Predicted Functional Partners:
amb3373
Nitrate reductase gamma subunit.
 
 
 0.966
amb3367
Sulfite reductase, dissimilatory-type alpha subunit.
 
 
 0.933
amb3368
Sulfite reductase, dissimilatory-type beta subunit.
 
 
 0.930
amb3376
Hdr-like menaquinol oxidoreductase cytochrome c subunit.
 
  
 0.925
amb3372
Dissimilatory sulfite reductase; Gamma subunit.
 
 
 
 0.920
amb3375
NADPH-dependent glutamate synthase beta chain and related oxidoreductase.
 
   
 0.902
amb3378
Hdr-like menaquinol oxidoreductase integral membrane subunit.
 
  
 0.902
amb3371
Uncharacterized conserved protein involved in oxidation of intracellular sulfur.
 
   
 0.876
amb3370
Uncharacterized protein involved in the oxidation of intracellular sulfur.
 
   
 0.854
amb3369
Intracellular sulfur oxidation protein dsrE.
 
   
 0.838
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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