STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3377Fe-S-cluster-containing hydrogenase components 1. (231 aa)    
Predicted Functional Partners:
amb3286
Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.987
amb3288
Tetrathionate reductase subunit C.
 
 0.979
amb3378
Hdr-like menaquinol oxidoreductase integral membrane subunit.
 
 
 0.972
amb3289
Fe-S-cluster-containing hydrogenase components 1.
  
  
 
0.916
amb3376
Hdr-like menaquinol oxidoreductase cytochrome c subunit.
 
  
 0.912
amb1299
Rhodanese-related sulfurtransferase.
     
 0.904
amb0855
Hypothetical protein.
     
  0.900
amb0856
Predicted secreted protein.
     
  0.900
amb3541
Anaerobic dehydrogenase; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.847
amb3375
NADPH-dependent glutamate synthase beta chain and related oxidoreductase.
 
   
 0.846
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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