Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb3382Thiol:disulfide interchange protein dsbD 1 precursor. (703 aa)    
Predicted Functional Partners:
amb2218
Thiol-disulfide isomerase and thioredoxins.
  
 
 0.876
amb2749
Thiol-disulfide isomerase and thioredoxins.
  
 
 0.876
amb3088
Thiol-disulfide isomerase and thioredoxins.
  
 
 0.876
amb4201
Thiol-disulfide isomerase and thioredoxins.
  
 
 0.876
msrB
Peptide methionine sulfoxide reductase msrB.
   
 
 0.825
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.799
amb3928
Antifreeze glycopeptide polyprotein precursor.
 
 
 0.753
amb1392
Protein-disulfide isomerase.
 
 
 0.718
amb3982
Protein-disulfide isomerase.
  
 
 0.677
amb2362
Uncharacterized protein involved in tolerance to divalent cations.
  
  
 0.574
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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