STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3391Predicted transcriptional regulator. (136 aa)    
Predicted Functional Partners:
amb3392
Hypothetical protein.
   
 
 0.841
iscS
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzyme; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
  
  
 0.519
amb3029
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzyme.
  
  
 0.519
amb2149
Hypothetical protein.
 
 
   0.506
amb2140
B-subunit of benzoyl-CoA reductase.
  
     0.490
amb3393
NAD-reducing hydrogenase diaphorase moiety largesubunit; hoxF homolog.
     
 0.476
amb3394
NAD-reducing hydrogenase diaphorase moiety small subunit; hoxU homolog.
       0.476
amb3395
NAD-reducing hydrogenase hydrogenase moiety small subunit; hoxY homolog.
       0.476
amb3396
NAD-reducing hydrogenase hydrogenase moiety large subunit; hoxH homolog; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
       0.459
amb2141
C-subunit of benzoyl-CoA reductase.
  
   
 0.443
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.