STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3397[NiFe] hydrogenase (HoxH-specific) C-terminal protease; hoxW homolog. (155 aa)    
Predicted Functional Partners:
amb3395
NAD-reducing hydrogenase hydrogenase moiety small subunit; hoxY homolog.
 
  
 0.919
amb3396
NAD-reducing hydrogenase hydrogenase moiety large subunit; hoxH homolog; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
  
 0.909
amb3394
NAD-reducing hydrogenase diaphorase moiety small subunit; hoxU homolog.
 
   
 0.884
amb3393
NAD-reducing hydrogenase diaphorase moiety largesubunit; hoxF homolog.
 
   
 0.861
amb0207
Ni,Fe-hydrogenase III large subunit.
  
  
 0.611
amb1990
Pyruvate-flavodoxin oxidoreductase.
     
 0.576
amb3398
Hypothetical protein.
       0.515
amb3612
Hypothetical protein.
  
     0.452
amb1114
Ni,Fe-hydrogenase I large subunit.
  
 
 0.437
amb1647
Ni,Fe-hydrogenase I large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
  
 
 0.437
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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