STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3405Response regulator containing a CheY-like receiver domain and a GGDEF domain; PAS/PAC domain. (424 aa)    
Predicted Functional Partners:
amb3312
PvrR.
 
 0.986
amb2166
PvrR.
 
 0.984
amb3093
Predicted signal transduction protein containing a membrane domain; EAL and a GGDEF domain.
 
 0.984
amb3300
Predicted signal transduction protein containing sensor and EAL domains.
 
 0.983
amb4099
FOG: EAL domain.
 
 0.978
amb1110
Signal transduction histidine kinase.
 
 
 0.916
amb0915
EAL domain.
 
 0.915
amb2928
Bacteriophytochrome; Light-regulated signal transduction histidine kinase.
    
 0.902
amb0553
Response regulator; Containing a CheY-like receiver domain and an HD-GYP domain.
 
 0.898
amb1281
Predicted signal transduction protein containing a membrane domain; EAL and a GGDEF domain.
 
 
0.888
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.