Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb3427Uncharacterized NAD(FAD)-dependent dehydrogenase. (387 aa)    
Predicted Functional Partners:
amb3428
Rubredoxin.
 
 
 0.924
amb3429
Rubredoxin; Belongs to the rubredoxin family.
 
 
 0.875
amb0532
Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase.
 
  
 0.785
amb4176
Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase.
  
  
 0.623
amb3430
Putative rubrerythrin.
     
 0.613
amb0521
Glutamate synthase [NADPH] large chain precursor.
  
  
 0.611
amb3426
Cytochrome C2, iso-2.
     
 0.596
amb2662
Hydrogenase expression/formation protein hupT.
  
 
 0.578
amb2922
Tungsten-containing aldehyde ferredoxin oxidoreductase.
 
 
   0.474
amb0531
Anaerobic dehydrogenase; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.447
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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