STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3472Uncharacterized protein conserved in bacteria. (371 aa)    
Predicted Functional Partners:
amb3503
Hypothetical protein.
  
     0.772
amb0980
CheY-like receiver.
  
     0.770
amb3823
Flagellar assembly protein fliX.
  
     0.769
amb0302
Skin secretory protein xP2 precursor.
  
     0.763
amb2246
Uncharacterized protein conserved in bacteria.
  
     0.762
amb4085
Hypothetical protein.
  
     0.758
amb0558
Hypothetical protein.
  
     0.757
amb3836
Hypothetical protein.
  
     0.750
amb3331
FOG: CheY-like receiver.
  
     0.747
amb4110
Hypothetical protein.
  
     0.731
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.