Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb3515Hypothetical protein. (171 aa)    
Predicted Functional Partners:
amb3514
Cell shape-determining protein; Involved in formation and maintenance of cell shape.
 
 
 0.996
mrdB
Bacterial cell division membrane protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
  
 0.937
amb3516
Cell division protein FtsI/penicillin-binding protein 2.
 
  
 0.930
amb3513
Actin-like ATPase involved in cell morphogenesis.
 
  
 0.856
amb2682
Hypothetical protein.
 
     0.777
amb3189
Hypothetical protein.
  
  
 0.776
amb0319
Hypothetical protein.
  
     0.769
amb3935
Uncharacterized protein conserved in bacteria.
  
   
 0.765
amb0836
Hypothetical protein.
  
     0.763
amb3934
Uncharacterized protein conserved in bacteria.
  
     0.760
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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