STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb3516Cell division protein FtsI/penicillin-binding protein 2. (627 aa)    
Predicted Functional Partners:
mrdB
Bacterial cell division membrane protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 0.999
amb3514
Cell shape-determining protein; Involved in formation and maintenance of cell shape.
 
 
 0.984
amb0524
Membrane carboxypeptidase.
 
 
 0.982
amb3236
Membrane carboxypeptidase/penicillin-binding protein.
 
 
 0.976
amb2451
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
 
 0.958
amb3513
Actin-like ATPase involved in cell morphogenesis.
 
 
 0.957
amb2965
Membrane carboxypeptidase/penicillin-binding protein PbpC.
  
  
 0.951
amb3847
Bacterial cell division membrane protein; Belongs to the SEDS family.
 
 0.932
amb3515
Hypothetical protein.
 
  
 0.930
amb3842
Cell division protein FtsI/penicillin-binding protein 2.
  
  
0.928
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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