STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3535Sulfate permease and related transporters; MFS superfamily. (731 aa)    
Predicted Functional Partners:
amb1695
Ankyrin repeat.
   
 0.736
amb0463
Hypothetical protein.
    
 0.734
amb0874
Hypothetical protein.
    
 0.734
amb2775
NADH:ubiquinone oxidoreductase subunit 4; Chain M.
  
 
 0.725
amb2225
Cytochrome b subunit of the bc complex.
   
 
 0.715
amb4089
Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.711
amb1110
Signal transduction histidine kinase.
 
 
 
 0.707
amb1432
Signal transduction histidine kinase.
 
 
 
 0.670
amb3534
Hypothetical protein.
       0.668
amb2930
Sensor protein barA.
 
 
 
 0.665
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.