STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3538Hypothetical protein. (257 aa)    
Predicted Functional Partners:
amb3537
Serine phosphatase RsbU, regulator of sigma subunit.
 
 
 0.967
amb1110
Signal transduction histidine kinase.
  
  
 0.873
amb1432
Signal transduction histidine kinase.
  
  
 0.782
amb1281
Predicted signal transduction protein containing a membrane domain; EAL and a GGDEF domain.
  
  
 0.769
amb2293
Signal transduction histidine kinase.
 
  
 0.760
amb1841
Hypothetical protein.
  
  
 0.746
amb3438
Sensor protein gacS.
  
  
 0.746
amb4146
Signal transduction histidine kinase.
  
  
 0.746
amb0650
Predicted periplasmic ligand-binding sensor domain.
  
  
 0.722
amb0614
Flagellar basal body protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.717
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (30%) [HD]