Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb3542Fe-S-cluster-containing hydrogenase components 1. (245 aa)    
Predicted Functional Partners:
amb3541
Anaerobic dehydrogenase; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.997
amb3543
DMSO reductase anchor subunit.
 
 
 0.994
amb3375
NADPH-dependent glutamate synthase beta chain and related oxidoreductase.
    
 0.916
amb3367
Sulfite reductase, dissimilatory-type alpha subunit.
  
 
 0.909
amb3368
Sulfite reductase, dissimilatory-type beta subunit.
  
 
 0.909
amb1299
Rhodanese-related sulfurtransferase.
     
 0.904
cysC
NodQ bifunctional enzyme; Catalyzes the synthesis of activated sulfate.
     
 0.904
amb2210
3'-phosphoadenosine 5'-phosphosulfate sulfotransferase/FAD synthetase and related enzyme; Reduction of activated sulfate into sulfite.
     
 0.902
amb0855
Hypothetical protein.
     
  0.900
amb0856
Predicted secreted protein.
     
  0.900
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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