Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb3548Hypothetical protein. (395 aa)    
Predicted Functional Partners:
amb3547
Outer membrane receptor protein; Mostly Fe transport.
 
   
 0.858
amb3549
Periplasmic protein TonB, links inner and outer membranes.
 
   
 0.820
amb2749
Thiol-disulfide isomerase and thioredoxins.
 
     0.818
amb3552
Biopolymer transport protein.
 
   
 0.785
amb3550
Biopolymer transport protein.
       0.773
amb3551
Biopolymer transport protein.
     
 0.773
amb3546
Hypothetical protein.
       0.612
amb0230
Putative copper export protein.
  
     0.579
amb0016
DNA segregation ATPase FtsK/SpoIIIE; Related protein.
   
 
 0.488
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
  
 
 0.469
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.