Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
amb3551Biopolymer transport protein. (144 aa)    
Predicted Functional Partners:
amb3550
Biopolymer transport protein.
 
 
 0.993
amb3549
Periplasmic protein TonB, links inner and outer membranes.
 
 
 0.989
tolQ
Biopolymer transport protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.970
amb3547
Outer membrane receptor protein; Mostly Fe transport.
 
  
 0.917
amb3212
Periplasmic protein TonB, links inner and outer membranes.
  
 
 0.867
amb3552
Biopolymer transport protein.
 
    
0.801
amb3548
Hypothetical protein.
     
 0.773
tolB
Periplasmic component of the Tol biopolymer transport system; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
  
 0.684
amb3546
Hypothetical protein.
       0.612
amb0311
Small-conductance mechanosensitive channel.
 
    
 0.607
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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