STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3576Hypothetical protein. (193 aa)    
Predicted Functional Partners:
amb3575
Hypothetical protein.
 
    0.951
amb3531
Uncharacterized conserved protein.
 
     0.791
amb3574
Hypothetical protein.
       0.780
amb3086
Nitrous oxide reductase.
  
    0.609
amb3577
CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase.
 
    0.603
amb3578
cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase.
 
    0.593
amb3081
Nitrous oxidase accessory protein.
  
     0.552
amb0492
Putative lipid carrier protein.
 
    0.529
amb0490
Collagenase and related protease.
  
    0.503
amb2222
Heme/copper-type cytochrome/quinol oxidase, subunit 1.
  
     0.486
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.