STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3583Enoyl-CoA hydratase/carnithine racemase. (345 aa)    
Predicted Functional Partners:
amb3587
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase.
  
 0.977
amb3902
3-hydroxyacyl-CoA dehydrogenase.
 
 0.966
amb0178
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
0.954
amb2588
Acyl-CoA dehydrogenase.
  
 0.951
amb2599
Acyl-CoA dehydrogenase.
  
 0.951
amb3599
Acyl-CoA dehydrogenase.
  
 0.951
amb0677
Acyl-CoA dehydrogenase.
  
 0.950
amb3231
Acyl-CoA dehydrogenase.
  
 0.950
amb0831
Acyl dehydratase.
  
 0.944
amb2990
Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a; Belongs to the enoyl-CoA hydratase/isomerase family.
0.937
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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