STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3588ABC-type branched-chain amino acid transport systems, ATPase component. (265 aa)    
Predicted Functional Partners:
amb3591
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.994
amb1477
Branched-chain amino acid ABC-type transport system; Permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.977
amb3590
Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
  
 0.976
amb1672
ABC-type branched-chain amino acid transport system; Permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.970
amb3589
Long-chain acyl-CoA synthetase.
 
    0.969
amb2872
ABC-type branched-chain amino acid transport system; Permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.959
amb2028
ABC-type branched-chain amino acid transport system; Permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.954
amb2603
ABC-type branched-chain amino acid transport system; Permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.954
amb1804
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.947
amb2325
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.941
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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