Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb3594Coenzyme F390 synthetase. (411 aa)    
Predicted Functional Partners:
amb3593
ABC-type branched-chain amino acid transport systems, ATPase component.
 
    0.896
amb3592
ABC-type branched-chain amino acid transport systems, periplasmic component.
 
    0.862
amb3595
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.853
amb3589
Long-chain acyl-CoA synthetase.
 
    0.829
amb3591
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
    0.813
amb3588
ABC-type branched-chain amino acid transport systems, ATPase component.
 
    0.805
amb3601
Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
  
 0.635
amb3590
Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
    0.626
amb3603
Uncharacterized conserved protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
   
 0.483
amb3390
ABC-type branched-chain amino acid transport systems, periplasmic component.
 
    0.428
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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