STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3624ABC-type multidrug transport system, permease component. (260 aa)    
Predicted Functional Partners:
amb3623
ABC-type multidrug transport system, ATPase component.
  
 0.978
amb4213
ABC-type multidrug transport system, ATPase component; ABC-type uncharacterized transport system, ATPase component.
  
 0.684
amb0182
ABC-type multidrug transport system; ATPase component.
  
 0.671
amb3621
Anthranilate phosphoribosyltransferase.
 
     0.643
amb1227
Nitroreductase.
  
  
 0.642
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
  
    0.604
amb0313
ABC-type multidrug transport system; Permease component.
  
  
  0.538
amb3861
Hypothetical protein.
  
    0.524
amb3625
Methyl-accepting chemotaxis protein; HD-GYP domain.
 
    0.517
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
  
  
 0.504
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.