Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
amb0567 | amb1110 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.949 |
amb0567 | amb1432 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.923 |
amb0567 | amb1434 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.433 |
amb0567 | amb1968 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.424 |
amb0567 | amb2179 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.455 |
amb0567 | amb3447 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.446 |
amb0567 | amb3632 | Signal transduction histidine kinase. | Chemotaxis response regulator protein-glutamate methylesterase. | 0.760 |
amb1110 | amb0567 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.949 |
amb1110 | amb1432 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.993 |
amb1110 | amb1434 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.950 |
amb1110 | amb1968 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.953 |
amb1110 | amb2179 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.728 |
amb1110 | amb2636 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.822 |
amb1110 | amb3048 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.947 |
amb1110 | amb3096 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.949 |
amb1110 | amb3447 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.711 |
amb1110 | amb3632 | Signal transduction histidine kinase. | Chemotaxis response regulator protein-glutamate methylesterase. | 0.854 |
amb1432 | amb0567 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.923 |
amb1432 | amb1110 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.993 |
amb1432 | amb1434 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.950 |
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