STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3707Aerobic-type carbon monoxide dehydrogenase; Large subunit CoxL/CutL homolog. (732 aa)    
Predicted Functional Partners:
amb2882
Aerobic-type carbon monoxide dehydrogenase; Small subunit CoxS/CutS homolog.
 
 0.993
amb2019
4-hydroxybenzoyl-CoA reductase gamma subunit.
 
 0.991
amb1303
Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homolog.
 
 0.989
amb2881
Aerobic-type carbon monoxide dehydrogenase; Middle subunit CoxM/CutM homolog.
 
 
 0.968
amb2021
4-hydroxybenzoyl-CoA reductase beta subunit.
 
 0.962
amb1484
Aerobic-type carbon monoxide dehydrogenase; Middle subunit CoxM/CutM homolog.
 
 0.952
amb2022
Xanthine and CO dehydrogenase maturation factor; XdhC/CoxF family.
 
  
 0.817
amb2809
Uncharacterized conserved protein.
 
  
 0.804
cysQ
3'-Phosphoadenosine 5'-phosphosulfate 3'-phosphatase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
       0.792
amb2880
Purine catabolism protein pucB.
 
   
 0.758
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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