Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
amb3710Histone acetyltransferase HPA2 and related acetyltransferase. (198 aa)    
Predicted Functional Partners:
amb3711
Hypothetical protein.
 
     0.641
amb3712
Putative translation factor; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
 
     0.635
amb1348
Hypothetical protein.
  
     0.626
amb3713
FAD/FMN-containing dehydrogenase.
       0.588
amb3709
Hypothetical protein.
       0.581
amb4480
Hypothetical protein.
  
    0.573
amb0045
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
  
   
 0.535
amb3101
Hypothetical protein.
  
     0.534
amb3600
Universal stress protein UspA and related nucleotide-binding protein.
 
    0.534
amb0231
TRAP-type uncharacterized transport system; Periplasmic component.
  
     0.527
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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