STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3736CRP/FNR family transcriptional regulator, cyclic AMP receptor protein; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. (232 aa)    
Predicted Functional Partners:
amb3439
Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
    
 0.910
amb1857
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase.
  
   
 0.773
amb2977
CRP/FNR family transcriptional regulator, transcriptional activator FtrB; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase.
  
   
 0.769
amb1396
CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase.
  
   
 0.768
amb1558
cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase.
  
   
 0.766
amb4369
Transcriptional activatory protein aadR; Anaerobic aromatic degradation regulator.
  
   
 0.741
amb3577
CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase.
  
   
 0.740
amb1397
CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase.
  
   
 0.733
rpoD
DNA-directed RNA polymerase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
    
 
 0.708
amb3578
cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase.
  
   
 0.708
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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