STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3773Large exoprotein involved in heme utilization or adhesion. (1274 aa)    
Predicted Functional Partners:
amb3772
Hemolysin activation/secretion protein.
 
 
 0.963
amb3771
Hypothetical protein.
  
 
 0.850
amb2963
Hypothetical protein.
  
    0.516
amb3770
Hypothetical protein.
       0.514
amb0030
Hypothetical protein.
  
 
 0.410
amb0733
Hypothetical protein.
  
 
 0.410
amb4327
Lysophospholipase L1 and related esterase.
  
 
 0.410
amb0352
Hypothetical protein.
  
    0.407
amb0474
Hypothetical protein.
   
    0.407
amb1763
Mu-like prophage FluMu protein gp28.
   
    0.407
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.