STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3777Hypothetical protein; Belongs to the 'phage' integrase family. (483 aa)    
Predicted Functional Partners:
amb3776
Hypothetical protein.
  
     0.775
amb4288
Hypothetical protein.
  
     0.775
amb2118
Hypothetical protein.
  
     0.774
amb4292
Integrase; Site-specific recombinase XerD.
  
   
 0.752
amb3768
Integrase; Site-specific recombinase XerD.
  
   
 0.743
amb1630
Hypothetical protein.
  
   
 0.718
amb3688
Integrase; Site-specific recombinase XerD.
  
   
 0.709
amb1418
Predicted membrane protein.
  
   
 0.654
amb4480
Hypothetical protein.
  
     0.636
amb0231
TRAP-type uncharacterized transport system; Periplasmic component.
  
     0.618
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.