STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3818Anaerobic dehydrogenase; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (688 aa)    
Predicted Functional Partners:
amb2225
Cytochrome b subunit of the bc complex.
  
 
 0.778
amb3819
ATPase involved in chromosome partitioning.
     
 0.743
amb2687
Nitrate reductase cytochrome c-type subunit; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
  
 
 0.736
amb0521
Glutamate synthase [NADPH] large chain precursor.
  
 
 0.699
amb3542
Fe-S-cluster-containing hydrogenase components 1.
 
 
 0.660
amb3289
Fe-S-cluster-containing hydrogenase components 1.
 
 0.658
napD
Uncharacterized protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
  
 
 0.650
amb1680
NADH dependant phenylglyoxylate.
  
 
 0.645
amb2921
Fe-S-cluster-containing hydrogenase components 2.
 
 
 0.623
amb1242
Fe-S-cluster-containing hydrogenase components 1.
 
 
 0.611
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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