STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3828Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (712 aa)    
Predicted Functional Partners:
amb3827
Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
 
 
 0.996
amb2856
Flagellar capping protein.
  
 
 0.957
amb0504
Flagellar hook protein FlgE.
 
 
 0.954
amb3825
Chemotactic signal-response protein cheL.
 
  
 0.914
amb3497
Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.884
amb0506
Flagellar hook-length control protein.
 
  
 0.883
flgI
Flagellar basal-body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.883
amb0614
Flagellar basal body protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.879
amb0505
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
  
 
 0.872
amb3329
Hypothetical 1041 kDa protein in hypE 3'region.
  
 
 0.860
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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