Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb3887FOG: CheY-like receiver. (144 aa)    
Predicted Functional Partners:
amb3558
C4-dicarboxylate transport sensor protein dctB.
 
 
 
 0.892
amb1434
Signal transduction histidine kinase.
 
 
 0.865
amb2930
Sensor protein barA.
   
 
 0.540
amb3884
Aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
       0.494
amb3885
Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.
       0.494
nadA
Quinolinate synthase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
       0.494
amb1110
Signal transduction histidine kinase.
   
 
 0.489
amb3883
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase.
     
 0.474
amb3882
Hypothetical protein.
       0.471
amb2205
Signal transduction histidine kinase.
  
 
 0.468
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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